Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFANKILTEKDTDQIRFSILASGSS-----------------------GNATLVET-----GDQKILIDCGLSGKKMEGLFAQVGRDMNDLDAILITHEHSDHIKGLGVLARK-----YKLPIYANAKTWKAMDNMIGEVS----------SDQKFQFDMETVKNFG----SMQVESFGVSHDAIEPMFYIFHKGNKKFVMITDTGYVSDRMKGHIAGADAYLFESNHDVEMLRMGRYPWNVKRRILGDEGHVSNEDAAIAMSEVITDQTKRIYLGHLSKDNNMKELARMSVTQTLMAEGIDVGGKLEIFDTDPDNATSIFTI |
| 3MD7 Chain:A ((24-269)) | ---------SPRNCLRFTLLGCGSSPGVPRINGDWGKCDPKNPKNRRRRASLLVERYDAEGNNTVVVIDTGPDFR---MQMIDS--GVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYCFETPVGSSYPPILSMHDIAPETPFSIEGAGGAIRFEPFSQVHGDIESLGFRI----GSVVYCTDVSAFPEQSLQYIKDADVLIIGALQYR-----------------PHPSHFSLGEALEWIEKL---SPKRAILTHMHVPLDY--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MD7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116164 for 1635 contacts (-71.0/contact) +
2D Compatibility (PS) -21307 + (NN) -2127 + (LL) 5596
1D Compatibility (HY) -11200 + (ID) 2400
Total energy: -147602.0 ( -90.28 by residue)
QMean score : 0.503
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