Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDEKEKNLNENSENESTPKREVEDTLHTPESAQPVQETPIVEGVTPEGEKFAGATEDAAEASSTNAFFEEASNKESEPARPAPGPRRAGTTGGGAVPPNRVNNGGSGNGNGEPPKRGKHFIGYFLTALIGVIIGGLIIFFVAWDNGDNADTTSNSNNKATKVEKVSVDTTSDVTKAVDKVQDAVVSVLNYQSSSSLDGTTTSEQEASSGSGVIYKKANGKAYIVTNNHVVADANKLEVTFTNGKKSEAKLLGTDEWNDLAVLEIDDKNVTTVAAFGDSDSLKLGEPAIAIGSPLGTEFSGSVTQGIISGLNRAVPVDTNGDGTEDWEADVIQTDAAINPGNSGGALINIEGQVIGINSMKISMENVEGISFAIPSNTVEPIIEQLETKGEVERPSLGVSLRDVDTIPETQQKNILKLPDSVDYGAMVQQVVSGSAADKAGLKQYDVIVELNGQKVTNSMTLRKILYGNDVKIGDKVKVKYYRDGKEKSTDIKLEAAKTTT---------------------------------------------------------------------------------------------- |
| 3PV2 Chain:A ((6-439)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------MPSMAPVLKNIMPAIVNV-------AVQGYLPNRKFESIGSGVIIDPNNG--VIITNDHVIRNASLITVTLQDGRRLKARLIGGDSETDLAVLKIDAKNLKSLV-IGDSDKLEVGDFVVAIGNPFG--LSQSATFGIVSALK-----------------NFIQTDAAINPGNSGGALVNAKGELIGINTAILV-----GIGFAIPINMVKDVAQQIIKFGSIHRGLMGIFVQHLT--PELAQA--MGYPEDFQ-GALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTIS--LLRVGSTVKIIVERDNKPLTLSAVVTDIKSHEQKLQSNNPFLYGLALRAFEQESPPHGNVIGVQVVGASENSAGWRAGIRPGDIIISANKKPVTDVKSLQTIAQEKKKELLVQVLRGPGSMYLLVI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PV2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112850 for 2427 contacts (-46.5/contact) +
2D Compatibility (PS) -30893 + (NN) -3755 + (LL) 7200
1D Compatibility (HY) -24800 + (ID) 5650
Total energy: -170748.0 ( -70.35 by residue)
QMean score : 0.494
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