Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKFLKKYGFYFLLLGVLSDFLTPYILGIFYPELNQMTRVMSVFGDVTSPVRGAFLVWSVVSGVFFVLALPAIYQSVVKTSRTLAILLASAIGLYGIGDCIFTGLFSIDTEQASWTFSTWVHNIGSGLGYAGFLIFPLFLVILYRKTGDKTRSNIYLVLLIVSLLSAGVYGLARIPAVNDLPVL--DKIGFCQRISFFFNYLPIVVFGIDRIRKP |
1IVV Chain:A ((590-623)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------FGLTHFPRVEDWPIMPVDTVGFKLRPEGFFDRSPVL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IVV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1542 for 89 contacts (-17.3/contact) +
2D Compatibility (PS) -3301 + (NN) -812 + (LL) 14400
1D Compatibility (HY) 800 + (ID) 50
Total energy: 9495.0 ( 106.69 by residue)
QMean score : 0.131
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