Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MNNNFLWGGATASYQCEGAWDVDGKAESMWDYYLHEAGLE-------NGDVASDHYHRYEEDIRMMKEGGQNSYRFSLSWPRI------IKNRQGDINLKGIEFYQNLLDTCKKYDIEPFVTLYHWDLPQYWE--ETGGWLDHDVCAAFEHYAKVCYDHFGDKITNWTTFNEPKWFVANGYKIGNYPPGY-QDTQKTMIAAYNVMYASALGVKAFKE---GGYPGQIGIVHSYTPVNGIDESIETKIAMRYADNYCNNWILDTAALGEFPVDLIAELAKSHDISFMKTDELQTIKQNTVDFIGLNYYSRTLVKPYTGGETQLQFNHSGKKGESKVLIKNWFEQVKDPANETTEWDTEIYPKGLQDGLIEAYERY-QLPLYVTENGIGVREDVSVP-----QVDDAYRIAFMNDHINAIFNAIDAGCDVRGYYAWSPFDLYSWKNGVEKRYGLVAVDFENNQIRKPKASYYWFKEMIESQGKLIKRREF |
| 1GNX Chain:A ((15-477)) | ALTFPEGFLWGSATASYQIEGAAAEDGRTPSIWDTYAR-TP--GRVRNGDTGDVATDHYHRWREDVALMAELGLGAYRFSLAWPRIQPTGRG------PALQKGLDFYRRLADELLAKGIQPVATLYHWDLPQELENA--GGWPERATAERFAEYAAIAADALGDRVKTWTTLNEPWCSAFLGYGSGVHAPGRT-DPVAALRAAHHLNLGHGLAVQALRDRLP--ADAQCSVTLNIHHVRPLTDSDADADAVRRIDALANRVFTGPMLQGAYPEDLVKDTAGLTDWSFVRDGDLRLAH-QKLDFLGVNYYSPTLVSA-H----------SPWPGADRVAFHQ------PPGETTAMG-WAVDPSGLYELLRRLSSDFPALPLVITENGAAFHDY----ADPEGNVNDPERIAYVRDHLAAVHRAIKDGSDVRGYFLWSLLDNFEWAHGYSKRFGAVYVDYPT-GTRIPKASARWYAEVARTGVLP------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GNX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175963 for 3774 contacts (-46.6/contact) +
2D Compatibility (PS) -45142 + (NN) -20522 + (LL) 2620
1D Compatibility (HY) -22000 + (ID) 8100
Total energy: -269107.0 ( -71.31 by residue)
QMean score : 0.519
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