Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIINSNFRSLGSYIMENIYKIPNYQREYSWEETELEDLWMDLSQIINGETESHFFGQIVIHVDKKEKAKLIIDGQQRTSTAVIFLAAMRELFTEMYNAGWDDAQFDAQDITTKFIGRYTQTRDERKLILGENDKSYFSNRIQSVSSEQLGLQKATKSQKRINFAYNYFYKKLEEEINSSDFLEDKYGLLKTFFSTFTEKCSVMFVETDDFNEAFIIFETLNARGKDLETADLLKNHLFKIANKKVGEVKKNWKQMLEFIGTVDTTKYIRHFWNSQNVFIREKDLYKEIRKKITTQFEAIIFIDDLVRLSEVYGGMKNPAEDNFFETDSQQVLNDLKRLGAKSFYPIILAMVKKDYGPNEIYEVLSAIEVLVVRNFVISGLVANKYETEFSKIAF-------KIYQEEVESVTEIINLIRTNII--ADDVFLNNFSSFKTTNKLRLRYILKKINDSYSKEIAVLNDNNKI---------HLEHIMPIKADGWDIIKEEHEEYLWKIGNLTLLGSEYNKKSTNKIFNDKKDIYEYSEVQLTRKLLDYDEWNIDVIKERQVELAELAVNIWKV |
| 3WEM Chain:A ((40-205)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AIGYGYQVKNAKVDNSTGKSLTALLQLIRNSPVYGPDIQFLSFTASFEEDDTLRIR-----ITDANNRRWEIPNEVLPRPPPPPSPPP---------QPTTTVLSHPHSDLVFTLFHTTPFGFTIYRKSTHDVLFDATPI---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WEM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12516 for 607 contacts (20.6/contact) +
2D Compatibility (PS) -10804 + (NN) 2807 + (LL) 35956
1D Compatibility (HY) -6800 + (ID) 1300
Total energy: 32375.0 ( 53.34 by residue)
QMean score : 0.034
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