Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VFIHGFQEEVGNLWQETLRHPFVRSLADGTLEKEAFYYYLLQDDYYLSHFEKVIEKSVEQAGTAELAAEMREVQVRLQQSELLMREQFYPRVGLTERDFSERKPAPTAYHYTSHLHRMVDFGSFGVTIAALLPCYALYADIGKMYEGARSSEPFYQELLDSYVDENYQKVVLQQKRLVEQAASMADARELALMKQAFQISVEMEWAFFDMAYKKQNWRGSVNYV
2QCX Chain:B ((42-249))
-------------WEGSFVHPFVQGIGDGTLPIDRFKYYVLQDSYYLTHFAKVQSFGAAYAKDLYTTGRMASHAQGTYEAEMALHREFAELLEISEEERKAFKPSPTAYSFTSHMYRSVLSGNFAEILAALLPCYWLYYEVGEKLLHCDPGHPIYQKWIGTYGGDWFRQQVEEQINRFDELAENSTEEVRAKMKENFVISSYYEYQFWGMAYRKEGWSDSA---
General information:
TITO was launched using:
RESULT:
Template:
2QCX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111404 for 1608 contacts (-69.3/contact) +
2D Compatibility (PS) -22519 + (NN) -10222 + (LL) 1180
1D Compatibility (HY) -12400 + (ID) 3550
Total energy: -158915.0 ( -98.83 by residue)
QMean score : 0.707
(partial model without unconserved sides chains):
PDB file :
Tito_2QCX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QCX-query.scw
PDB file :
Tito_Scwrl_2QCX.pdb
: