Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------MRAELAVYFIAGTQDIVRGTLPSVLEEALKGGITCFQYREKGAGSLQTASERKEMALECQKLCAKYQVPFIINDDVALALEIGADGIHVGQTDEAIRQVIASCSGKMKIGLSVHSVSEAKEAERLGAVDYIGVGPIFPTISKADAEPVSGTAILEEIRRAGITIPIVGIGGINETNSAEVLTAGADGVSVISAITQSDDCHSVIKQLKNPGSPS----
1G67 Chain:A ((1-225))
GIRMTRISREMMKELLSVYFIMGSNN-TKADPVTVVQKALKGGATLYQFREKGGDALTG-EARIKFAEKAQAACREAGVPFIVNDDVELALNLKADGIHIGQEDANAKEVRAAI-GDMILGVAAHTMSEVKQAEEDGA-DYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFREEIQTYKTGR
General information:
TITO was launched using:
RESULT:
Template:
1G67.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129576 for 1795 contacts (-72.2/contact) +
2D Compatibility (PS) -23666 + (NN) -15742 + (LL) 512
1D Compatibility (HY) -15200 + (ID) 4950
Total energy: -188622.0 ( -105.08 by residue)
QMean score : 0.702
(partial model without unconserved sides chains):
PDB file :
Tito_1G67.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G67-query.scw
PDB file :
Tito_Scwrl_1G67.pdb
: