Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSYGELIREIRLSKGLTQKEVYTGIISRSYAIGFEKGKHEITLSLFEEILKRIMVPLDEFFFIYRDFSSTEDDSFWIDFVELSGKNDVVGMQALLDKITLE-R---TE--QSEVRKAILHTRIQTINHYLRTNVFDESNISDEYKKIIHDYLW----KMQTWTLEEVRIFSNGISFF----EEEVQIHFYQIMLKSYEKYRYYDRGRLLFCHLFANLTDELIIQNKINYANLVLEKLKEASETSGSFNSAFYRIVANYYQGAIWMKEGEV-EKGYRQAKRAIQTWKELHYEAIADLYSVVLKQFLEKENIQVED |
| 3U3W Chain:A ((3-282)) | AEKLGSEIKKIRVLRGLTQKQLSENICHQSEVSRIESGAVYPSMDILQGIAAKLQIPIIHFYEVLIYSDIERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVL---------K--KV--DYEYCILELKKLLNQQLTGIDVYQ--NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALH---DNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEIS---CRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDILEMHAYKEALVNK-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U3W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120986 for 1954 contacts (-61.9/contact) +
2D Compatibility (PS) -27733 + (NN) -7112 + (LL) 2896
1D Compatibility (HY) -9600 + (ID) 1900
Total energy: -164435.0 ( -84.15 by residue)
QMean score : 0.425
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