Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VTEKTIRLTTAQALVKFLNQQYIEVDDEMAPFVDGIFTVFGHGNVVGIGQALEEDPGHLNVYQGKNEQGMAHAAIAYAKQKNRKRIYACSASAGPGSANLITAASTALANNLPVLFLPADTFATRQPDPVLQQLEHESSAAITTNDGFQAVSRYFDRVQRPEQLMSALIRAFEVMTNPASAGPATICIAQDTEGEAFDYPVEFFQKRIHYLNRQIPTKRELTEAARLIQASKTPVIIVGGGARYSDAREELIALSEQSNIPLVETHAGKSTVEFDFKNNLGGTGILGTLAANKAIRDADLVIGIGTRYTDFTTSSKTAFGPATKFININVSRMQTYKLD-A-FQVVGDAKATLAELAPLLKGYQTQFGDRIAVYKAEWLAERTRLQNTKFNREAFTPEIKDQFDQATLNEYADSLQTEFTQTEALITINDTVAPDSIVVCSAGSLPGDLQRLWNPAVPNTYHLEYGYSCMGYEINGALGAKMAAANNQEVYSIVGDGSFCMSHSELLTSLQYGKKINIMLFDNSGFGCINNLQMANGSDSFFCEFRDSDNQIMQVDYAKIAEGYGAKVYRANTKEDLISALEDAKKQTKTTLIDMKVLPKTMSEGYLNWWNVGVSEVSNKESIKQAYEEKQTNLKNARLY |
| 3EYA Chain:A ((2-535)) | ------KQTVAAYIAKTLESAG----------VKRIWGVTGD-SLNGLSDSLNRM-GTIEWMSTRHEEVAAFAAGAEAQLSG--ELAVCAGSCGPGNLHLINGLFDCHRNHVPVLAIAAHIPSSEIGSGYFQE--------THPQELFRECSHYCELVSSPEQIPQVLAIAMRKAVL--NRGVSVVVLPGDVALKPAPEGATMHWYHA-PQPVVTPEEEELRKLAQLLRYSSNIALMCGSGCAG--AHKELVEFAGKIKAPIVHALRGKEHVEYDNPYDVGMTGLIGFSSGFHTMMNADTLVLLGTQFPYRAF-----YPTDAKIIQIDINPASIGAHSKVDMALVGDIKSTLRALLPLVEEK-ADRKF-----LDKALEDYRDARKGL-------------------DDLAKPSEKAIHPQYLAQQISHFAADDAIFTCDVGTPTVWAARYLKMNGKRRLLGSFNHGSMANAMPQALGAQATEP-ERQVVAMCGDGGFSMLMGDFLSVVQMKLPVKIVVFNNSVLGFV-----------------GTE--LHDTNFARIAEACGITGIRVEKASEVDEALQRAFSIDGPVLVDVVVAKEELAIP----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EYA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -263518 for 4942 contacts (-53.3/contact) +
2D Compatibility (PS) -56866 + (NN) -24363 + (LL) 7696
1D Compatibility (HY) -20800 + (ID) 5900
Total energy: -363751.0 ( -73.60 by residue)
QMean score : 0.413
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