Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFTSYFLTFEDGARLEIMSRTDVTGKTTGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEITW
3E5D Chain:A ((3-127))
-KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTGKTTGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEITW
General information:
TITO was launched using:
RESULT:
Template:
3E5D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50141 for 821 contacts (-61.1/contact) +
2D Compatibility (PS) -13662 + (NN) -5916 + (LL) 208
1D Compatibility (HY) -16000 + (ID) 6150
Total energy: -91661.0 ( -111.65 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_3E5D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E5D-query.scw
PDB file :
Tito_Scwrl_3E5D.pdb
: