Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVKDILTKELVVFDLEATTKETAIEEMAEMLDERGILADKATYVQAVLEREAHSTTGIGNNIAIPHGKSESVTKSAIVFARTKEMIEWESLDDEPVNMIFLLAITDSDKTDGHLKILAEIATKLMDDDIVESLKNTRDKEEVIRILNGGVVEI
2A0J Chain:A ((3-147))
-LIGEILPLSHIVLDMEVGSKKRLFEEAGLLLERESSLS-HADVFECLFAREKLGSTGLGQGVAIPHGRHAGVKQATGAFIRTREPVGFDAPDGKPVSLIFILLVPENAT-GEHLEVLSKLAGKFSQKSIRESLMTVSSAEEVRAILT------
General information:
TITO was launched using:
RESULT:
Template:
2A0J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102326 for 1123 contacts (-91.1/contact) +
2D Compatibility (PS) -15712 + (NN) -6638 + (LL) 532
1D Compatibility (HY) -11600 + (ID) 2300
Total energy: -138044.0 ( -122.92 by residue)
QMean score : 0.642
(partial model without unconserved sides chains):
PDB file :
Tito_2A0J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A0J-query.scw
PDB file :
Tito_Scwrl_2A0J.pdb
: