Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKGLKKMKYSIQFSDAIHILAYIEIFKNTNLLSSEIIAGSVKTNPANIRRIMSNLKKANLITTQTGKANPILTKPPEEISLLDVYKSIEGNTNLIHVDPKTNPDCIVGANIQQVLSSKYELLQQKIELEMDEIKLDSIIHDISVLESKDRPQNNEFITKFL
1XD7 Chain:A ((11-132))
---------------AIHILSLISMDEKT---SSEIIADSVNTNPVVVRRMISLLKKADILTSRAGVPGASLKKDPADISLLEVYRAVQK-----------NPKCPVGKKIQNALDETFESVQRAMENELASKSLKDVMN---------------------
General information:
TITO was launched using:
RESULT:
Template:
1XD7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44851 for 712 contacts (-63.0/contact) +
2D Compatibility (PS) -11936 + (NN) -6283 + (LL) 3056
1D Compatibility (HY) -10400 + (ID) 2450
Total energy: -72864.0 ( -102.34 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_1XD7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XD7-query.scw
PDB file :
Tito_Scwrl_1XD7.pdb
: