Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKVVVKNVTFGEGAPKICVPMVGKTVAALKEEAEMLQTIDLDVVEWRVDFFEDVKDLAKVEAALGEIRAILPETPILFTFRSAKEGGELAVSDEFYFELNETLAGTGKIDLVDVELFNEEADVLRLIETAHKNNVKVVMSNHDFDKTPAKEEIVSRLTRMEALGADLPKIAVMPKSAGDVLTLLDATNTVFE-KANQPIITMSMAGTGVISRLAGEVFGSAMTFGAAKKASAPGQIDVNELRHVLDLLHKQF
4H3D Chain:D ((7-256))--KVQVKNITIGEGRPKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVELFMGDEVIDEVVNFAHKKEVKVIISNHDFNKTPKKEEIVSRLCRMQELGADLPKIAVMPQNEKDVLVLLEATNEMFKIYADRPIITMSMSGMGVISRLCGEIFGSALTFGAAK--SAPGQISFKELNSVLNLLHKS-


General information:
TITO was launched using:
RESULT:

Template: 4H3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140432 for 2096 contacts (-67.0/contact) +
2D Compatibility (PS) -27282 + (NN) -14085 + (LL) 468
1D Compatibility (HY) -29600 + (ID) 7250
Total energy: -218181.0 ( -104.09 by residue)
QMean score : 0.623

(partial model without unconserved sides chains):
PDB file : Tito_4H3D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4H3D-query.scw
PDB file : Tito_Scwrl_4H3D.pdb: