Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLLKNINELAAKQKSEGLTAFEKERQAALRQEYLKKIRGTVQDNLHHVTIIDPLGDDVTPKKLKEIQAELRG
3BHP Chain:A ((3-52))
SNAKIARINELAAKAKAGVITEEEKAEQQKLRQEYLKGFRSSMKNTLKSV------------------------
General information:
TITO was launched using:
RESULT:
Template:
3BHP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8250 for 237 contacts (34.8/contact) +
2D Compatibility (PS) -5775 + (NN) -6001 + (LL) 1712
1D Compatibility (HY) -800 + (ID) 1000
Total energy: -3614.0 ( -15.25 by residue)
QMean score : 0.728
(partial model without unconserved sides chains):
PDB file :
Tito_3BHP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BHP-query.scw
PDB file :
Tito_Scwrl_3BHP.pdb
: