Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDKQAILNNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAEC-TGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLMTYMNYTKEQFSVIHPGGAVGNKLLNK
3FXA Chain:A ((2-193))
MDKQAILDNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTG-KIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLMTYMNYTKEQFSVIHPGGA--------
General information:
TITO was launched using:
RESULT:
Template:
3FXA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123211 for 1493 contacts (-82.5/contact) +
2D Compatibility (PS) -20676 + (NN) -12930 + (LL) 168
1D Compatibility (HY) -27600 + (ID) 9400
Total energy: -193649.0 ( -129.70 by residue)
QMean score : 0.640
(partial model without unconserved sides chains):
PDB file :
Tito_3FXA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FXA-query.scw
PDB file :
Tito_Scwrl_3FXA.pdb
: