Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LIIDVLQHVPHEGPGLIANWARENQHQLKIHSLF--EENAHVPNDSDFLIVLGGPMGINDTA-EFPWL--KDERKLIKRLSEQHKPVFGVCLGAQQIAATFGSEITVNKEKEVGWFPVKRT-----SDKLLFFPKSLNVFHWHQDTFALPTGSTRLFASEGCLNQAFLYGENIIGLQFHFEMEKAGIETILRIDEAFITPGK---YVQSVEVMREKDVPEDNKQMLEAILDYLINPKTI
3L7N Chain:A ((3-234))
--IHFILHETFEAPGAYLAWAALRGHDVSMTKVYRYEKLPKDIDDFDMLILMGGPQSPSSTKKEFPYYDAQAEVKLIQKAAKSEKIIVGVCLGAQLMGVAYGADYLHSPKKEIGNYLISLTEAGKMDSYLSDFSDDLLVGHWHGDMPGLPDKAQVLAISQGCPRQIIKFGPKQYAFQCHLEFTPELVAALIAQEDDLDTQSQTETYVQTAEEMQTFDYSSMN-QALYSFLDRLTE----
General information:
TITO was launched using:
RESULT:
Template:
3L7N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127850 for 1870 contacts (-68.4/contact) +
2D Compatibility (PS) -23581 + (NN) -6524 + (LL) 624
1D Compatibility (HY) -13600 + (ID) 3450
Total energy: -174381.0 ( -93.25 by residue)
QMean score : 0.505
(partial model without unconserved sides chains):
PDB file :
Tito_3L7N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L7N-query.scw
PDB file :
Tito_Scwrl_3L7N.pdb
: