Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIVLIASLIFIAQTCLGFFQVKYYQHHMNKVANKYAGKIGYHLYSEMERLKFRT---SAVAILVVNENHIVHEC--QILTGKTVFAQFKTFTNYHHKELSEILTELSSKNKNTIQEKAIIKTVNSCMKAL------------------
3N1E Chain:A ((2-141))
DQWSMLRHFDHITKD---------YHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSPCFRNICKQMTKMHEAIFDLLPEEQTQMLFLRINASYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQALKGLKDLDLNMAEIWE
General information:
TITO was launched using:
RESULT:
Template:
3N1E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30950 for 702 contacts (-44.1/contact) +
2D Compatibility (PS) -12163 + (NN) -4553 + (LL) 792
1D Compatibility (HY) -4800 + (ID) 800
Total energy: -52474.0 ( -74.75 by residue)
QMean score : 0.352
(partial model without unconserved sides chains):
PDB file :
Tito_3N1E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N1E-query.scw
PDB file :
Tito_Scwrl_3N1E.pdb
: