Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LLTKRIIPCLDVTAGRVVKGVNFVSLTDVGDPVEIAKAYNEAGADELVFLDITATVELRQTMIDVVERTAEQVFIPLTVGGGISSVSDMKELLQAGADKISLNSAAIKRPELIQEGAAKFGNQCIVVAIDAKWNGTNWSVFTRGGRNDTGLDAIEWAKKAVQLGAGEILLTSMDGDGTKNGYDIPLTKAISEAVSVPVIASGGCGNAAHMVEVFEKTKATAALAASIFHYGELSIKNVKTTLLEKGVNIRP
4EVZ Chain:B ((1-250))
MLAKRIIPCLDVKDGRVVKGVNFENLRDAGDPVELAARYDEEGADELVFLDIT----GRETMLEVVERTAEQVFIPLTVGGGIRSVEDASRLLRAGADKVSINTAAVKNPELITEAAEEFGSQAVVVAIDAKRVGGGWEVFTHGGRKPTGLDAVEWARKVVELGAGEILLTSMDRDGTKAGYDLELTRAVSEAVSVPVIASGGAGELEHFAEVFELEGADAALAASIFHFGEITIREVKAYLRERGIEVR-
General information:
TITO was launched using:
RESULT:
Template:
4EVZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -158015 for 2180 contacts (-72.5/contact) +
2D Compatibility (PS) -27173 + (NN) -12086 + (LL) 352
1D Compatibility (HY) -26800 + (ID) 8550
Total energy: -232272.0 ( -106.55 by residue)
QMean score : 0.643
(partial model without unconserved sides chains):
PDB file :
Tito_4EVZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EVZ-query.scw
PDB file :
Tito_Scwrl_4EVZ.pdb
: