Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIVIIDYDTGNTKSISKALDFIGLQNKISSDATEISQADGVILPGVGAYPEAMKELTRRGLNKTLKEIAAGGKPILGVCLGMQLLLESSNEH-SFTNGLGLIPGHVEKLPEDPEFAVPHMGWNQLQIKRATPLTKQLDGE-YVYYVHSYYANCPEEYIIATSGYSIEVPGMINKGNIYGAQFHPEKSGQIGLEILKGFKEVTYSCKSSQQ
4GUD Chain:A ((5-203))-VVIIDTGCANISSVKFAIERLGYAVTISRDPQVVLAADKLFLPGVGTASEAMKNLTERDLIELVKRVE---KPLLGICLGMQLLGKLSEEKDEIVQCLGLVDGEV-RLLQTGDLPLPHMGWNTVQVKEGHPLFNGIEPDAYFYFVHSF-AMPVGDYTIAQCEYGQPFSAAIQAGNYYGVQFHPERSSKAGARLIQNFLEL---------


General information:
TITO was launched using:
RESULT:

Template: 4GUD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113992 for 1620 contacts (-70.4/contact) +
2D Compatibility (PS) -20277 + (NN) -4527 + (LL) 624
1D Compatibility (HY) -19600 + (ID) 4000
Total energy: -161772.0 ( -99.86 by residue)
QMean score : 0.474

(partial model without unconserved sides chains):
PDB file : Tito_4GUD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GUD-query.scw
PDB file : Tito_Scwrl_4GUD.pdb: