Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKALKIALTKGRLEKDAVALLEKAGIDCSSMTDKKRKLIFHSSTQPISFILVKAVDVMTYVKHGVADIGIVGKDVLMEAS-KSHYEMLDLEIGKCQFCLASTPDFDPSSYRR-KIIATKYPTVASKFFREKGEDVEIIKIEGSVEIAPVLDLADAIIDIVETGSTLKENGLIIYEKMYPISARLIVNKASLKQNKTQIFHLIDQLEQAIKEELAE
1Z7N Chain:F ((2-205))
---IKIAITKGRIQKQVTKLLENADYDVEPILNLGRELQIKTKDD-LQIIFGKPNDVITFLEHGIVDIGFVGKDTLDENDFDDYYELLYLKIGQCIFALASYPDFSNKNFQRHKRIASKYPRVTKKYFAQKQEDIEIIKLEGSVELGPVVGLADAIVDIVETGNTLSANGLEVIEKISDISTRMIVNKSSFKFKKDKIIEMVERLEDA-------
General information:
TITO was launched using:
RESULT:
Template:
1Z7N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165834 for 1585 contacts (-104.6/contact) +
2D Compatibility (PS) -21950 + (NN) -8418 + (LL) 1176
1D Compatibility (HY) -22800 + (ID) 5050
Total energy: -222876.0 ( -140.62 by residue)
QMean score : 0.623
(partial model without unconserved sides chains):
PDB file :
Tito_1Z7N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z7N-query.scw
PDB file :
Tito_Scwrl_1Z7N.pdb
: