Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLLNEENSFYNVDLLNLLKDSSEAVLPYKRIRFRRNQQILAEGAETDYFYIIEDGVVSMSKN-TCKEDSIINFLGKQECIGPLTLLGGAKSPVNYTTI--SEVSVYQFERKYVLNKFLSSPDVFWQMNALMQSMVTPMLEREGYVNLPS----SEKVLAGLIACGERFGRIESDGSCLIPYYFTQKILGNYLNLARAYVATNLRKLEEDGIIALSPKPWRVNNFEIHKQKLKENHEPYI
2XGX Chain:A ((6-213))
-------NS-----LLTMFREL-----PLQIEQFERGKTIFFPGDPAERVYLLVKGAVKLSRVYESGEEITVALLRENSVFGVLSLLTGQRSDRFYHAVAFTPVQLFSVPIEFMQKALIERPEL---ANVMLQGLSSRILQTEMMIETLAHRDMGSRLVSFLLILCRDFGIPSPDG-ITIDLKLSHQAIAEAIGSTRVTVTRLLGDLRESKLIAIHKKRITVFN----------------
General information:
TITO was launched using:
RESULT:
Template:
2XGX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112178 for 1436 contacts (-78.1/contact) +
2D Compatibility (PS) -21446 + (NN) -11730 + (LL) 3188
1D Compatibility (HY) -17200 + (ID) 2200
Total energy: -161566.0 ( -112.51 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_2XGX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XGX-query.scw
PDB file :
Tito_Scwrl_2XGX.pdb
: