Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHKHHLSKKLFFAGLVLFIIGAIGVAFTMNTGKMIEKGEPLTKQWDLSTENIKKIAFSSERDASIEWKESTTGKNYIELKGNYSANDKKAIQQLEPVSEDGTSFDITVPEEDDWYNGFGKIYAYGKQKVTIYLTKDTK-----------LADLEVKSHSGDIDVADFKVKKFVSSTNSG-ELKVTNLEANTAQMATSSGDLTLSNIKANSSIETD---SGKTELTNLTGDLEVN-G-GSGDVNVAGVKAKKLKIAIDS-GDIELTSGTVTDLAVLTTSSGDIDANTKGKIQAE-SDSGSIELAGATNNVTAKTS-SGDIDVAFTKQVKNIEINSDSGEVELELPGDFKAIYEASSNSGSVKAPTSDSNTDNRVTVKTSSGDIKIEK |
| 3PET Chain:A ((4-221)) | ----------------------------------------------------------------------------------------------------GIQPSKKLITRDYKVKEFNKIDAGTVGNIYYTQSTDGKTDLQIYGPDNIVALIQVAVKDNTLFLSIDKSKKV--RNFKKMKITITSPTLNGISF-KGVGDVHIENGLTTDNLDIESKGVGNVDIQSLTCQKLNVQSMGVGDVKLEG-TAQIAALHSKGVGNIEAGNLRANAVEASSQGVGDITCNATESIDAAVRGVGSIKYKGSPTIKSLSKKGVGTIKNI---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PET.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11092 for 1532 contacts (7.2/contact) +
2D Compatibility (PS) -20633 + (NN) -2701 + (LL) 10012
1D Compatibility (HY) -3600 + (ID) 2100
Total energy: -7930.0 ( -5.18 by residue)
QMean score : 0.381
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