Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLDKKIISALSYFSLFFAPVITPAIIWCTTKDKEIRHHVKWALLTQATFVAGIVVMILLYNNVPFSTNSADTINFLALATVFFIVFLNVSILIFNLIRGITRIVKHSDDNWARC
3P8D Chain:A ((90-105))--------------------------------------------------------------------------------------------------NEQVLACWSDCRFYPA


General information:
TITO was launched using:
RESULT:

Template: 3P8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2555 for 54 contacts (-47.3/contact) +
2D Compatibility (PS) -1915 + (NN) -2009 + (LL) 9856
1D Compatibility (HY) 400 + (ID) 100
Total energy: 3677.0 ( 68.09 by residue)
QMean score : 0.672

(partial model without unconserved sides chains):
PDB file : Tito_3P8D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3P8D-query.scw
PDB file : Tito_Scwrl_3P8D.pdb: