Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYQSITANDLEQDLKKVPHNILDVRDADAFVEGHIPDAINIPINELPEKLATLDKEKAYTIICYAGGRSERASQFLAAEGFDVTNVMGGMGAFHGTVTN
3GK5 Chain:A ((101-190))
-YRSINAADLYENIK--AYTVLDVREPFELIFGSIANSINIPISELREKWKILERDKKYAVICAHGNRSAAAVEFLSQLGLNIVDVEGGIQSW------
General information:
TITO was launched using:
RESULT:
Template:
3GK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62317 for 657 contacts (-94.9/contact) +
2D Compatibility (PS) -9921 + (NN) -2600 + (LL) 552
1D Compatibility (HY) -10000 + (ID) 1850
Total energy: -86136.0 ( -131.11 by residue)
QMean score : 0.648
(partial model without unconserved sides chains):
PDB file :
Tito_3GK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GK5-query.scw
PDB file :
Tito_Scwrl_3GK5.pdb
: