Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METRELKNGQIMMIRKATKEDSSNIITYLNEVAGETDYLSFGQGEFAFSIAEEAEYIEESDKNPGSVMLLCFIDDELASISQLIGHIKKRELHTSELAISIRKKYWGLGIGTICMEELIKYAKSSEYLKLIYLEVVTENKRAINLYKKFGFIEAGEIPALM-QVDRRYLDVTMMYLVI
2I79 Chain:A ((3-171))
---------YELLIREAEPKDAAELVAFLNRVSLETDFTSLDGDGILLTSEEMEIFLNKQASSDNQITLLAFLNGKIAGIVNITADQRKRVRHIGDLFIVIGKRYWNNGLGSLLLEEAIEWAQASGILRRLQLTVQTRNQAAVHLYQKHGFVIEGSQERGAYIEEGKFIDVYLMGKLI
General information:
TITO was launched using:
RESULT:
Template:
2I79.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119073 for 1249 contacts (-95.3/contact) +
2D Compatibility (PS) -17865 + (NN) -2150 + (LL) 556
1D Compatibility (HY) -12000 + (ID) 2450
Total energy: -152982.0 ( -122.48 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_2I79.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I79-query.scw
PDB file :
Tito_Scwrl_2I79.pdb
: