Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGEMTLAFIEEQYKELDNLNNKE-NPAVLTRNTSTGELFVRKIIPSSF------APVIEQLKNLSSKYLPKIEVMIPKGNQLIVYEEYINGKNLADLMKTNAPFDTDEVTRLMLMLSDALTELHANAIIHRDIKPSNIMISSD--GVLKLIDFDASRMFEVGKNQDTVNLGTIGYAAPEQYGYSQTD-ARSDIYSIGVLMLELLLGKNTLPDKEH------------------------ATSLEKIAMQAGAFDPEQRYQSIQDFRTAVKNDSLGPSYVSELSDFTELDDSPTESAWKTPADEYENDFIPWYKHIPGFRTGTPWKMIVAVFGYMFLIFGLFSPPTEGVKMSHTVNFFSNFFLIVPAFVIFTNLCGIWSKLPLLKSPSPGTRKAGIVIYIIVCVSIYGIYNEIFS |
| 3UC3 Chain:A ((17-292)) | -------HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYS----------------PAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFE----PRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRI-SIPEIKT--------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UC3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94303 for 1504 contacts (-62.7/contact) +
2D Compatibility (PS) -22756 + (NN) -16937 + (LL) 10500
1D Compatibility (HY) -12000 + (ID) 2500
Total energy: -137996.0 ( -91.75 by residue)
QMean score : 0.647
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