Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDGEKETSKLLHELKKATNLRQVLDENEAEFKSSEMVTYLKELLAEKKLTKASVIRAARLHETYGYQIFSGVRRPSRDRTIALSFGFKLSGLEASRLLKYTEYPPLYAKNRRDAIIIFALDHGYTLDQTNDSLYDLEEALIETYKEEKPLI
3OST Chain:A ((9-127))
---KPPNSVLLKKFSKGKILELEIHAK---IPEKRLYEGLHKLLEG--------------WKQYG---LKNLVFNITNMIITGKLVNDSILFLRSTLFEIMVLP----NGDGRSLIKFNKKTG-----STKTLTKLATEIQIILQKEGVLD
General information:
TITO was launched using:
RESULT:
Template:
3OST.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29632 for 859 contacts (-34.5/contact) +
2D Compatibility (PS) -12690 + (NN) -3573 + (LL) 2960
1D Compatibility (HY) -7600 + (ID) 1000
Total energy: -51535.0 ( -59.99 by residue)
QMean score : 0.634
(partial model without unconserved sides chains):
PDB file :
Tito_3OST.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OST-query.scw
PDB file :
Tito_Scwrl_3OST.pdb
: