Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFSKATNYALHTMVYLANLSPEKSVGVKELATKQNVSPTYLSKVLTMLVKAGFVESVTGVNGGYKLAEPASSISFLDVIQAIEGKGAFFHCDPKNHSESQPHCLIGEVMNKAEQQMEDYLSKQTVGSIVVEIEKHQH
4CIC Chain:A ((5-144))
LKVSTKGHYGVQAMFDLAQHFGEGPVSLKSIAERQGLSEPYLEQLIAVLRKAGLVKSVRGAQGGYILAREPRDIKVGDIIRVLEG------------SLKFDFSVTKSVWEKVKKSIEEVLDSITLADMLKDAEEAQ-
General information:
TITO was launched using:
RESULT:
Template:
4CIC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74027 for 821 contacts (-90.2/contact) +
2D Compatibility (PS) -13231 + (NN) -4772 + (LL) 256
1D Compatibility (HY) -10800 + (ID) 2000
Total energy: -104574.0 ( -127.37 by residue)
QMean score : 0.632
(partial model without unconserved sides chains):
PDB file :
Tito_4CIC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CIC-query.scw
PDB file :
Tito_Scwrl_4CIC.pdb
: