Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VAKRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAKKAAAALLKKQNEEKIEAFKKQIDS-YIAAENLGTKMTTKYSDEGLLITIRDDILFQSGSAELSAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARAVNFMEAIIQENSEV---NPGEFSARGYGEFRPVAKNDIAANREKNRRVEIMVRPINRDTLDEDE |
| 3WPX Chain:A ((34-180)) | ---------------------------------------------------------------------------------------------------------SQEMETLMESIKKALEREIEQGAIEVENLGQQ---------IVIRMREKGAFPEGSAFLQPKFRPLVRQIAELVKDVPGIVR--VSGHTDNRPLDSELYRSNWDLSSQRAV----SVAQEMEKVRGFSHQRLRVRGMADTEPLLPNDSDDNRALNRRVEISI------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WPX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20853 for 1073 contacts (-19.4/contact) +
2D Compatibility (PS) -15532 + (NN) -8510 + (LL) 9092
1D Compatibility (HY) -8000 + (ID) 2650
Total energy: -46453.0 ( -43.29 by residue)
QMean score : 0.532
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