Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLIPDNLLQPVVGKKQVEPKESLAEELVELPFISLLMENSPAPLIKGEADNEEQATIPLKEIAPSLVSAKLLDSEPETKLPSAPLELKEVKETLAAIAKQAIDQPKIDSAPQVAQPPEMNTPKEPTKNTTREQQPPPELIMPTKDSPKLAENVAKNQPALAKLPQEKEAVQLFKASIKEPVTAKEEVAVKKPAESSNIWHDTTKQLTPAAKVEVPVTLKQLDKTITDQIEQLQKFQVKQNKAFFAIQPESLGKVEVLLKKMPDKIFVHIEYQEQ-------TAKQKLEQMAQDLHNRFRDRGVEVAVTMTEKQAPKENGQGSEGRHHGESKKEKERENPHQEKAKQQVFDLEEET |
| 3W4R Chain:A ((139-188)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NFDGLDLDWEYPGAADRGGSFSDKDKFLYLVQELRRAFIREGKGWELTAA--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W4R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11687 for 200 contacts (-58.4/contact) +
2D Compatibility (PS) -4897 + (NN) -4149 + (LL) 21124
1D Compatibility (HY) -2400 + (ID) 500
Total energy: -2509.0 ( -12.54 by residue)
QMean score : 0.687
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