Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFNWYKKYREEKRDYKQYKKRIAALPEDYKTAMKAIETYLWNFAKGAG--MFEILKNVLEMFENAAADNLELKAVVGDDLAEFADNLLSEFPEETWMDKQRQKLRDSIK
2O3L Chain:A ((2-77))
-------------EYKMMMARVAALPEDYQFVFKKIQNYMWNFSAGNGMDMLHIQYELIDLFEAGAAEGRQVLDITGEDVASFADELVA--------------------
General information:
TITO was launched using:
RESULT:
Template:
2O3L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58992 for 471 contacts (-125.2/contact) +
2D Compatibility (PS) -8238 + (NN) -6162 + (LL) 2752
1D Compatibility (HY) -8400 + (ID) 1550
Total energy: -80590.0 ( -171.10 by residue)
QMean score : 0.843
(partial model without unconserved sides chains):
PDB file :
Tito_2O3L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O3L-query.scw
PDB file :
Tito_Scwrl_2O3L.pdb
: