Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNINMKVARVEKDISQEELAKLIHVSRQTISSVEAGNYNPTLNLCIAICKALGKTLDDLF-WEEDDNV
2GZU Chain:A ((5-66))
----NLKLIREKKKISQSELAALLEVSRQTINGIEKNKYNPSLQLALKIAYYLNTPLEDIFQWQPE---
General information:
TITO was launched using:
RESULT:
Template:
2GZU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42275 for 399 contacts (-106.0/contact) +
2D Compatibility (PS) -6674 + (NN) -2896 + (LL) 432
1D Compatibility (HY) -6400 + (ID) 1450
Total energy: -59263.0 ( -148.53 by residue)
QMean score : 0.621
(partial model without unconserved sides chains):
PDB file :
Tito_2GZU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GZU-query.scw
PDB file :
Tito_Scwrl_2GZU.pdb
: