Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKVLLAILSMVLLLSLAACGGSSDSSKDKNGKEEIVMWGSWSGDQIKQLEKQIDSYNKSQDKYKVKYVMQE-N---VEEKLLTGIAG-GELPDIIMWDRYQTALYAPKGVLEPLDKLVKEDNLKMDDFYEESVKEM-TYSDKLYGLPLLNDNRILFYNKKLLQEAGVK-PPTTWDELATAAQKTTKW-D----GNKMTQAGMSLQDV---G---LFNLYLMQAGGELVT-SDN-KETAFNSEQGLEVLNYWDKMQNDLKVYQRGF------DDGSDAFAAGKEAMTYNGPWALADYNK--V-EDLDYGVVEPPKGPNGDKGAIMGGFGLVMPKQAEHKDGAWDFMKWWTTKPENGVEFAKISGWLPANKIAAEDE-YFTKDPNYSVFVNTMKYAKIRPTVAGYADVEGLAMKPQFEKFMNGNISAEKALSQAEKEGNQILKEERDK |
| 1EU8 Chain:A ((2-407)) | -------------------------------EEGKIVFAVGGAPNEIEYWKGVIAEFEKKYPGVTVELKRQATDTEQRRLDLVNALRGKSSDPDVFLMDVAWLGQFIASGWLEPLDDYVQKDNYDLSVFFQSVINLADKQGGKLYALPVYIDAGLLYYRKDLLEKYGYSKPPETWQELVEMAQKIQSGERETNPNFW----GFVWQGKQYEGLVCDFVEYVYSNGGSLGEFKDGKWVPTLNKPENVEALQFMVDLIHKYKISPPNTYTEMTEEPVRLMFQQGNAAFERNWPYAWGLHNADDSPVKGKVGVAPLPHFPGHKSAATLGGWHIGISKYSDNKALAWEFVKFVES-YSVQKGFAMNLGWNPGRVDVYDDPAVVSKSPHLKELRAVFENAVPRPIVPYYPQLS-EIIQKYVNSALAGKISPQEALDKAQKEAEELVKQ---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EU8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68103 for 3262 contacts (-20.9/contact) +
2D Compatibility (PS) -40602 + (NN) -18159 + (LL) 2844
1D Compatibility (HY) -21600 + (ID) 4900
Total energy: -150520.0 ( -46.14 by residue)
QMean score : 0.558
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