Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEELEVIHKGLANAKNGFKAVPGKLYLTATYIVHKPNDY-------F--------DEEINIPLNRVAKIRGVRTKILGKELLSNILEIDMISGVKYQFVVN---KQKKWLEAVSEVLESRGESEKLG
1T77 Chain:A ((2077-2182))
-----PVSLSTPAQLVAPSVVVKGTLSVTSSELYFEVDEEDPNFKKIDPKILAYTEGLHGKWLFTEIRSIFSRRYL-----LQNTALEIFMANRVAVMFNFPDPATVKKVVNFLPR------------
General information:
TITO was launched using:
RESULT:
Template:
1T77.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33905 for 590 contacts (-57.5/contact) +
2D Compatibility (PS) -9462 + (NN) 1246 + (LL) 1692
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -44479.0 ( -75.39 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_1T77.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T77-query.scw
PDB file :
Tito_Scwrl_1T77.pdb
: