Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVGINTDTENISELLKTYWSIQRISAGYADQNAASLGLTIQQLAMINVIYSTPGISVADLTKRLIITGSSAAANVDGLISLGLVVKLNKTIPNDSMDLTLKLSKKGEDLSKRSTANAFMYKAMMKVFENLTENEIEELIRLNKKVETLLKKSK
2GXG Chain:A ((6-144))
--------ENRIQIMSTIAKIYRAMSRELNRRLGELNLSYLDFLVLRATS-DGPKTMAYLANRYFVTQSAITASVDKLEEMGLVVRVR--DREDRRKILIEITEKGLETFNKGIEI--YKKLANEVTGDLSEDEVILVLDKISKILKRIEEI-
General information:
TITO was launched using:
RESULT:
Template:
2GXG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56541 for 875 contacts (-64.6/contact) +
2D Compatibility (PS) -14763 + (NN) -3984 + (LL) 808
1D Compatibility (HY) -6000 + (ID) 1450
Total energy: -81930.0 ( -93.63 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_2GXG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GXG-query.scw
PDB file :
Tito_Scwrl_2GXG.pdb
: