Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIGKRIKNLRLSKNLTQEELGERTDLTKGYISQLERDL-SSPSIETLFAILEVLGSTPKDFFDEEEHNQKVIYGELEHTFFEDEEKGYRIKWLVPESNEKEMEPVLLEIEANSCFKSFEPSLSETFAYVLKGEVTVLLGRNEYVAKKGEAIYFHAADEHQIINRSSEHATLILVATESYL
3QQ6 Chain:A ((2-65))
--IGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEK-------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3QQ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25798 for 430 contacts (-60.0/contact) +
2D Compatibility (PS) -6876 + (NN) -4646 + (LL) 9684
1D Compatibility (HY) -5600 + (ID) 1200
Total energy: -34436.0 ( -80.08 by residue)
QMean score : 0.704
(partial model without unconserved sides chains):
PDB file :
Tito_3QQ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QQ6-query.scw
PDB file :
Tito_Scwrl_3QQ6.pdb
: