Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDILRDIGVIARALDSISNIEFKELNLAKGQFIYLVRICENQGIIQEKLVDILKIDRTTASRAIKNLEKNGLIIKKQNKNNKKNKLLFPTEKGQQLYPLIIRENEYSNAVALKGFTEAEINMLTDALKKVKENIADDWLYVKKGNKRSY
4MNU Chain:B ((5-153))
-KDILRDIGVIARALDSISNIEFKELNLAKGQFIYLVRICENQGIIQEKLVDILKIDRTTASRAIKNLEKNGLIIKKQNKNNKKNKLLFPTEKGQQLYPLIIRENEYSNAVALKGFTEAEINMLTDALKKVKENIADDWLYVKKGNKRSY
General information:
TITO was launched using:
RESULT:
Template:
4MNU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45984 for 921 contacts (-49.9/contact) +
2D Compatibility (PS) -16056 + (NN) -3660 + (LL) 208
1D Compatibility (HY) -21200 + (ID) 7450
Total energy: -94142.0 ( -102.22 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_4MNU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MNU-query.scw
PDB file :
Tito_Scwrl_4MNU.pdb
: