Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VSKNVKKIVITLFALIMTVGLASGFIAPIKASADTNNFTVKVEYVDADGAEIAPSDILTDYHYVSTPKDIPGYKLREIPHNATGNITDTGIIVRYIYDKTIDVRYVDETGKDLLPVVEIINSEAAVLETISDYTFVKKDISIDGLHIIFRYKKNISTIPDFGKPNQVTVNYLDENKTPIAPSLYLSGLFNEAYNVPMKKIKGYTLLKYDSEILGVFTESPQTINIIYQKKAPEQAPSMEPLPDPTVPESPQVEKSKIKKSKIETTEKRTTSKVKIAPKALKLTKVEQKKQETKDSLPKTGDSSVNLLITCLGIIAISCGVYLLVQQSQKRRRKE |
| 2KT7 Chain:A ((34-135)) | --------------------------------MDTNNFTVKVEYVDADGAEIAPSDTLTDYHYVSTPKDIPGYKLREIPHNATGNITDTGIIVRYIYDKIIDVSYVDETGKDLLPVVEIINSEAAVLEHHHHHH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2KT7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -17040 for 524 contacts (-32.5/contact) +
2D Compatibility (PS) -11088 + (NN) -3861 + (LL) 15740
1D Compatibility (HY) -12000 + (ID) 4600
Total energy: -32849.0 ( -62.69 by residue)
QMean score : 0.389
|
|
|