Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNYIKVHQPLNVDLRTQKTQTKLYTVLERFYLEGRTFESISIKDLCEQAQISRATFYRHHEEIIQIIEVQILRTMQYFSLEFDQIILTKENIQRLILRSIQKNPLLFQAIFWSRAENIFLDVVSGEILRISLLKEISFSDSNFIPNCFARMILSLAAEIQQSNKDYTNGQLVELIQEAARFLQK
3O60 Chain:A ((3-184))
--NYVKVHQPLNVDLRTQKTQTKLYTVLERFYVEDRTFESISIKDLCEQARVSRATFYRHHKEIIQVIEVQILRTMQYFSLEFDQIILTKENIQRLILRTIQKNPLLFQVIFWSRAENIFIDVVSGEILRISLLKEVSFSDSKFMPNCFARMILSLAAEIQQSNKDYTNDQLVELIQEAARFLQ-
General information:
TITO was launched using:
RESULT:
Template:
3O60.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114666 for 1242 contacts (-92.3/contact) +
2D Compatibility (PS) -19469 + (NN) -3622 + (LL) 192
1D Compatibility (HY) -30000 + (ID) 8400
Total energy: -175965.0 ( -141.68 by residue)
QMean score : 0.569
(partial model without unconserved sides chains):
PDB file :
Tito_3O60.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O60-query.scw
PDB file :
Tito_Scwrl_3O60.pdb
: