Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTFQSCVKIINEWDIVAARQLGRKISKEIGFGTVDQ-ARITTAISELARNIFLYA----GRGEICIEKVSESGKQGMIIVAKDKGPGIVDIRKVMQDGYTTSGGL---GAGLPGVKRLMDSFDIESSIEGDSKGTVITTTKWVR
1THN Chain:A ((33-137))
--------------------------------TMDELTEIKTVVSEAVTNAIIHGYNNDPNGIVSISVIIEDGVVHLTV--RDEGVGIPDIEEARQPLFTTKPELERSGMGFTIMENFMDEVIVESEV---NKGTTVYLKKH--
General information:
TITO was launched using:
RESULT:
Template:
1THN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33516 for 636 contacts (-52.7/contact) +
2D Compatibility (PS) -10219 + (NN) -2580 + (LL) 3200
1D Compatibility (HY) -4800 + (ID) 1550
Total energy: -49465.0 ( -77.78 by residue)
QMean score : 0.492
(partial model without unconserved sides chains):
PDB file :
Tito_1THN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1THN-query.scw
PDB file :
Tito_Scwrl_1THN.pdb
: