Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVVKQKADYAALKEELIAYAYEIGIQKIGFTTADPFLFLKERLLEAEALDLFTGFEHPVIEERVYPELIFKEPQSIIAIALAYPSKLKEAPVSKKGA----RRGVFARASWGIDYHTVLREKLALLETFLIERLPDVRMKSMVDTGELSDVAVAERAGIGWRGKNTLL---ITPEYGSWVYLGEMITNIPFEPDTPAS----DLCGSCNQCVKACPTGSLLGEGKMNPKICLSYLTQTKDFLDE--KYREVLHNRLYGCDTCQVVCPYNRGHDFHFHEEMEPDPELVRPELKPLLHISNRAFKEQFGDMAGSWRGKKPIQRNAIIILARYKDKTAVPDLIDCLQNDPRPVIRGTAGWALRKIGGRDAEEAVERALQTEQDVQVLQELTAIPN |
| 4RAS Chain:A ((354-572)) | -------------EAIKALGYYLGADFVGICRAEPWMYYASDEVEGKPIEAYHDYAVVMLIDQGYETMEGASGDDWISASQSMRAYMRGAEIAGVMAAHCRRMGYSARSH--SNAHSEVIHNPAIL---------------MAGLGEVSRIG------------DTLLNPFIGPRSKSIVF----TTDLPMSVDRPIDFGLQDFCNQCRKCARECPCNAI----SFGDKVMFNGYEIWKADVEKCTKYR-VTQMKGSACGRCMKMCPWNR-------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RAS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53413 for 1608 contacts (-33.2/contact) +
2D Compatibility (PS) -21505 + (NN) -4007 + (LL) 11960
1D Compatibility (HY) -13200 + (ID) 2600
Total energy: -82765.0 ( -51.47 by residue)
QMean score : 0.239
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