Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQAIDAILGHYSVRKFEDKDLTEEALTLLIKSAQAASTSSFVQAYSIIGITDKDIREQISAIAGNQPYTVQTGQLFIFVADLARHHAILEEH-QVDTAALETSEKWLVSVIDAALAAQNMAIAAESLGLGICFIGGIRNDVEQIAEILDLPPYTMPLFGLTIGHPVANKEKAKPRLPQDLVYHENSYKKMNPE---TLAEYDKQIKTYYNERTAGKRVEGWSEQIARGLGRPSRLDLKAFLEKQHLNQK
3N2S Chain:A ((2-248))
-NNTIETILNHRSIRSFTDQLLTAEEIDTLVKSAQAASTSSYVQAYSIIGVSDPEKKRELSVLAGNQPYVEKNGHFFVFCADLYRHQQLAEEKGEHISELLENTEMFMVSLIDAALAAQNMSIAAESMGLGICYIGGIRNELDKVTEVLQTPDHVLPLFGLAVGHP-ANLSGKKPRLPKQAVYHENTYNVNTDDFRHTMNTYDKTISDYYRERTNGKREETWSDQILNFMKQKPRTYLNDYVKEKGFNK-
General information:
TITO was launched using:
RESULT:
Template:
3N2S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107228 for 1780 contacts (-60.2/contact) +
2D Compatibility (PS) -26971 + (NN) -14923 + (LL) 464
1D Compatibility (HY) -21600 + (ID) 6250
Total energy: -176508.0 ( -99.16 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_3N2S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N2S-query.scw
PDB file :
Tito_Scwrl_3N2S.pdb
: