Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLGII----WGIIVVLLAV---------------WLLGIIFHI---AGGLINILLVIVLILVIWNLIQMARNKRK---
2KVV Chain:A ((1-78))
MAQIIFNEEWMVEKALMVRTGLGARQIESYRQGAWIEGVHFKRVSPSGEKTLRGTTWYNYPEINKFIRDSLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2KVV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54502 for 228 contacts (-239.0/contact) +
2D Compatibility (PS) -5778 + (NN) -1427 + (LL) 0
1D Compatibility (HY) 800 + (ID) 550
Total energy: -61457.0 ( -269.55 by residue)
QMean score : 0.746
(partial model without unconserved sides chains):
PDB file :
Tito_2KVV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KVV-query.scw
PDB file :
Tito_Scwrl_2KVV.pdb
: