Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQLITTENKLAGSKKALEIIEKGITSGEVNTLGLATGSTPETLYAELVKSDVDTKNVTTTNLDEYVGLAASDPNSYHYYMNDLLFSKKAFKESFLPNGEATDAEAECARYEEILSEHPIDIQVLGIGTNGHIGFNEPGTSFDSITHKVVLTDSTREANKRFFEREEDVPTHAYSMGIKSIMNAKKIILLAFGENKAQAIKETIKGPVDVNCPASVLQNHPDVTVILDNEAASLL
2RI0 Chain:A ((2-232))
MKTIKVKNKTEGSKVAFRMLEEEITFG-AKTLGLATGSTPLELYKEIRESHLDFSDMVSINLDEYVGLSADDKQSYAYFMKQNLFAAKPFKKSYLPNGLAADLAKETEYYDQILAQYPIDLQILGIGRNAHIGFNEPGTAFSSQTHLVDLTPSTIAANSRFFEKAEDVPKQAISMGLASIMSAKMILLMAFGEEKAEAVAAMVKGPVTEEIPASILQTHPKVILIVDEKAGA--
General information:
TITO was launched using:
RESULT:
Template:
2RI0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101188 for 1948 contacts (-51.9/contact) +
2D Compatibility (PS) -25405 + (NN) -15542 + (LL) 456
1D Compatibility (HY) -21200 + (ID) 6300
Total energy: -169179.0 ( -86.85 by residue)
QMean score : 0.664
(partial model without unconserved sides chains):
PDB file :
Tito_2RI0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RI0-query.scw
PDB file :
Tito_Scwrl_2RI0.pdb
: