Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLEKNYKFLLWIYIFWFLGSVLLVSLHIIPPELTAVQSLFLVFTGVFAAVFFIMQYGKWLGSAITLLIFVVSTCIEWMQLSYTDEYIGSTLGGSVYGIPITMGFIWVGMVAGTHIIAREITLKINIDWIRGGIYSFIAATMVMIFEVLIEPITMQSKQLYITQNGFTILQLSDFINWWLLGLILHLMIYFILSLTDSWERLKYPDLKSEIVIVYWIIIAFFVFLSFYLDLWTSIAIIIVSNIIFTACYFFSLEKETQTKKKSE |
| 3NYA Chain:A ((102-133)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILMKMWTFGNFWCEFWTSIDVLCVTASIWTLC---------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3NYA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -13493 for 119 contacts (-113.4/contact) +
2D Compatibility (PS) -2935 + (NN) 2827 + (LL) 22220
1D Compatibility (HY) -6400 + (ID) 550
Total energy: 1669.0 ( 14.03 by residue)
QMean score : 0.192
|
|
|