Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LVIYLLAGFFLLLFIVLSFIDRRRISNGIILTMALFFSVLSVVYATFSKGNELLVSVMGTVLLLLVLLIPFFVVGIATMLIVNGRLMLKREGRKLANMLPLIIGLGILALIITWFGSILKTGSPILGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNFPRYNQDFLIVLGSGLIGGDRVPPLLASRLNRAIKFYDKQYAKKGKRATFIVSGGQGAN-------------------ETISEAEAMRGYLIE-QGIDENFIIMEDQSVNTLQNMKFSKAKMDAIM-SNYNSLFSTNNFHLFRAGIYARKAGLKSQGIGAKTA---LYYMPNA--------LIREFIAITVMYKKVHMVLLGLLLLFFAFLAIIGVTFR |
| 3CA8 Chain:A ((33-211)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------VPYQADCVILAGNAVM----------PTIDAACKIARDQQ-----IP-LLISGGIGHSTTFLYSAIAQHPHYNTIRTTGRAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQAVERVHTAIVVQDPTMQRRTMATFRRMTGDNPD--APRWLSYPGFVPQLGNNADSVIFINQLQGLWPVERYLSL--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CA8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48187 for 1160 contacts (-41.5/contact) +
2D Compatibility (PS) -15250 + (NN) -413 + (LL) 19136
1D Compatibility (HY) -4000 + (ID) 1450
Total energy: -50164.0 ( -43.24 by residue)
QMean score : 0.413
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