Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKSIRPELRDIQVSGIRTFNTRVTG----IPDMIRLTLGEPDFPTPDHVKQAAISAIEENFTNYTPNAGMPELLEAASIYFHEKYDLSYS-NKEIIVTVGATEAISVALQTILEPGDEVILPDPIYPGYEPLITLNKAHPVKVDTT-ETNFKLTPEQLKAHITPKTKALIIPYPSNPTGVTLSKDELSALAEVLKETGIFVIADEIYSELTYHEEHVSIAPM-L-RDQTIVINGLSKSHAMIGWRIGFLLAPEILTQEMLKIHQYSVTCASSISQKAALEAITNGKDDAFQMRTEYKTRANFTQDRLEKMGFTVIPPDGAFYFFVKLPDEIAENSFDWAVKLAEEAKVAVVPGNAFSEKGDRYFRLSYATSFNNLAEALDRMAQFVEK |
| 1O4S Chain:A ((14-387)) | ----VSRRISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISPD-QVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVD---NSYMVQTFKERKNFVVERLKKMGVKFVEPEGAFYLFFKVRGD----DVKFCERLLEEKKVALVPGSAFLK--PGFVRLSFATSIERLTEALDRIEDFLN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O4S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -220409 for 3178 contacts (-69.4/contact) +
2D Compatibility (PS) -40669 + (NN) -27200 + (LL) 600
1D Compatibility (HY) -31200 + (ID) 6750
Total energy: -325628.0 ( -102.46 by residue)
QMean score : 0.580
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