Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSFSKLMMAVCSGLLLVATAIGTVGYYFFSEGSWYKILIEQKIFYIPFVVFVPLTAISIGLIIGGLIGYFVKQKFESIDFSIRLLGQGDLEKKITSEEDENFLEVQQVYKQIDRLRDKMKAQTILTQKLASDRAESTGQTKEAILSEERHRIARELHDSVSQQLFAAMMLLSALNEQSEKSATPAMQKQLKMVESIVNESQSEMRALLLHLRPTQLEGKSLKTGIEQLLKELTTKLPIEVEWQIEDISLQKGIEDHLFRIVQELLSNTLRHSKAKLLEVRLVTMDNLAVMKVVDDGVGFDMDNVRQGSYGLQNMRERVAEFGGTIKIISFPGRGTSVEIKIPLVAKKDVESE |
4GT8 Chain:A ((4-131)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKDKSLGEGIKDLVIDLQKKVPMKVVHEIQDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGATFHIVSLPDSGTRIEVKAPL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GT8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87851 for 954 contacts (-92.1/contact) +
2D Compatibility (PS) -14475 + (NN) -6878 + (LL) 20080
1D Compatibility (HY) -11600 + (ID) 3050
Total energy: -103774.0 ( -108.78 by residue)
QMean score : 0.639
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