Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKVLLVDDHEMVRIGVSAYLSVQDDMEVVGEAENGREGADMALELRPDIILMDLVMDEMDGIEATKEIMQNWKEAKIIIVTSFIDDEKVYPALEAGASSYMLKTSTASEIADAIRATYGGDSVLEPEVTGKMMQRLTAKPEKNLHDDLTNRENEILLLIAEGKSNQEIADELFITLKTVKTHVSNILSKLDVQDRTQAAIYAFKHDLVEKK
4IF4 Chain:A ((2-208))
-IKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMEDMDGVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTSRGESVFEPEVLVKMRNRMKKRAE--LYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHNLIQ--
General information:
TITO was launched using:
RESULT:
Template:
4IF4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109136 for 1592 contacts (-68.6/contact) +
2D Compatibility (PS) -22086 + (NN) -6725 + (LL) 320
1D Compatibility (HY) -23200 + (ID) 6400
Total energy: -167227.0 ( -105.04 by residue)
QMean score : 0.602
(partial model without unconserved sides chains):
PDB file :
Tito_4IF4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IF4-query.scw
PDB file :
Tito_Scwrl_4IF4.pdb
: