Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTETRTEKKKKTTSTFTKVMKIASVALLGIIFFSITGLAAKYYITVQNTFSKINVPLESSNKTLSDLEKKKPFSVLLMGSDARAGEKNGRADTIILATANKQQNAVEMVSIPRDTKVDYGNGDIGKINASYSNGGPSGTVSAVEKLM-PGVPVDYFISINMEGFKDLVDAVGGITVYNDIDLTEVNSKFVKGNITLNGTEALQYVRIRHEDPRGDFGRQDRQRDVIIGIANKVISSSGVSNFESIMKAVGDNFQTNMTLTDITSMAANYSSVLKNVDSQELKGEGEMIYSESYGFDLYYFAPDKTDLERIITMFKKSLDITE |
3OWQ Chain:A ((70-320)) | ---------------------------------------------------------------------KKPFSVLLMGSD------NGRADTIILATANKQQNAVEMVSIPRDTKVDYGN-DIGKINASYSNGGPSGTVSAVEKLMPG-VPVDYFISINMEGFKDLVDAVGGITVYNDIDLTEVNSKFVKGNITLNGTDALQYVRIRHEDPRGDFGRQDRQRDVIIGIANKVIS-------ESIMKAVGDNFQTNMTLTDITSMATNYSSVLKNVDSQELKGEGEMIYSESYGFDLYYFAPDETDLERVINMFKKSLDIT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OWQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96886 for 1794 contacts (-54.0/contact) +
2D Compatibility (PS) -25004 + (NN) -4611 + (LL) 5736
1D Compatibility (HY) -32800 + (ID) 11500
Total energy: -165065.0 ( -92.01 by residue)
QMean score : 0.473
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